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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5417261_5417995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5417261 - 5417995

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCACAT

U12 Branch Point Sequence:

GTAGCAGCACAT

Flanking Amino Acid:

IKSSVMLLDQMKDSLINLQN

Intron Amino Acid Position:

904

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

70.4

35.4

Major BPS

53.7

0.09

1.1

60.7

37.6

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

26.8

-2.7

2.8

31.2

42.4

Minor BPS

32.2

-1.2

2.3

48.38

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034729

5352688 - 5419757

67070

ENSAPLT00000026528

5371313 - 5419757

48445

ENSAPLT00000045884

5360421 - 5418917

58497

ENSAPLT00000026453

5360421 - 5418917

58497

ENSAPLT00000040004

5360421 - 5418917

58497

ENSAPLT00000025086

5360421 - 5418956

58536

ENSAPLT00000039254

5401222 - 5419757

18536