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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5417261_5422261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5417261 - 5422261

Intron Length:

5001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCA

5'SS Class:

strong_major

3'SS Sequence:

CATCATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATCATCT

Flanking Amino Acid:

IKSSVMLLDQGCRRT*

Intron Amino Acid Position:

904

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

70.4

35.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

77.5

0.62

0.9

73.4

36.4

Minor 5ss

26.8

-2.7

2.8

31.2

42.4

Minor BPS

51.3

0.12

2.1

79.56

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039125

5360421 - 5422752

62332