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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5427744_5428354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5427744 - 5428354

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTTCCAACTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAC

U12 Branch Point Sequence:

TTCCTTCCAACT

Flanking Amino Acid:

SKAEEAAQENATDYLAIPSE

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.4

67.1

44.6

Major BPS

61.9

0.3

1.2

70.7

33.5

Major PPT

74.1

0.54

0.9

66.4

33.3

Minor 5ss

37.2

-1.4

3.3

44.7

43.5

Minor BPS

48.1

-0

1.8

69.82

41.2

Associated Gene:

Gene:

SCN3B

Ensembl Gene ID:

ENSAPLG00000010155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045358

5425940 - 5433848

7909

ENSAPLT00000010582

5427647 - 5441593

13947