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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5428494_5429541_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5428494 - 5429541

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGAGG

5'SS Class:

major

3'SS Sequence:

ATTTTCTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTTCTCAACA

Flanking Amino Acid:

RLIHLTVVEEAGEDFTSVIS

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

55.4

48.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.9

0.65

0.9

74.7

34.3

Minor 5ss

30.2

-2.3

3.2

30.7

42.8

Minor BPS

73.7

0.74

1.4

81.94

32.6

Associated Gene:

Gene:

SCN3B

Ensembl Gene ID:

ENSAPLG00000010155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045358

5425940 - 5433848

7909

ENSAPLT00000010582

5427647 - 5441593

13947