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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5431520_5433085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5431520 - 5433085

Intron Length:

1566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

CTTCTCCTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTCTCTTACAT

Flanking Amino Acid:

WVSSAVLVVWAGFCSAVCVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

70.4

38.6

Major BPS

0.87

0.8

85.6

Major PPT

76.9

0.6

0.7

69.6

31.1

Minor 5ss

33.5

-1.9

3.5

41.3

45.2

Minor BPS

56.2

0.27

1.7

74.05

42.7

Associated Gene:

Gene:

SCN3B

Ensembl Gene ID:

ENSAPLG00000010155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045358

5425940 - 5433848

7909

ENSAPLT00000010582

5427647 - 5441593

13947