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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5433275_5433630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5433275 - 5433630

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAACTCCC

5'SS Class:

major

3'SS Sequence:

CTCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

CCACCCTGAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

60.6

44.5

Major BPS

1.2

61.8

35.9

Major PPT

81.6

0.71

0.7

73.1

31.8

Minor 5ss

40.6

-1.1

2.8

46.4

41.8

Minor BPS

1.8

63.42

46.1

Associated Gene:

Gene:

SCN3B

Ensembl Gene ID:

ENSAPLG00000010155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045358

5425940 - 5433848

7909