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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5460540_5462489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5460540 - 5462489

Intron Length:

1950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

ATTTCTTCTACA

Flanking Amino Acid:

MVKKKSDVYSIEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

75.1

0.62

65.6

Major PPT

86.6

0.82

0.7

80.9

30.4

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

58.8

0.27

1.8

73.88

37.4

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976