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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5462631_5464255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5462631 - 5464255

Intron Length:

1625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGAATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

TTCTGCTTACTA

Flanking Amino Acid:

NEDLKKELDLDDHRLSASEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

62.1

0.3

1.4

61.1

Major PPT

72.6

0.51

1.1

63.5

46.3

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

55.9

0.18

2.1

70.44

42.7

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976