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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5465680_5465857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5465680 - 5465857

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCATCCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTTGTTATAC

Flanking Amino Acid:

MASFSKMIPQQALVIRDAEK

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

77.2

0.61

0.8

73.5

31.4

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

49.2

-0

2.3

70.91

40.6

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976