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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5465993_5466248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5465993 - 5466248

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

CATTTCATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTAAAG

Flanking Amino Acid:

IRLISAQGCKVDNSSLTGES

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

68.8

0.42

1.1

68.1

36.3

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

65.9

0.36

1.8

72.89

38.9

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976