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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5468402_5468765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468402 - 5468765

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCCT

5'SS Class:

major

3'SS Sequence:

TCTGTCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

GATTCTATGATT

Flanking Amino Acid:

PGQENLPIMKRVVVGDASET

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

60.5

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

0.59

0.9

70.2

35.4

Minor 5ss

31.7

-2.1

3.6

48.5

47.2

Minor BPS

57.5

0.32

1.6

73.53

37.3

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976