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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5468901_5469158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468901 - 5469158

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGCATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GTTCTTTCAAAT

Flanking Amino Acid:

IPFNSTNKFQLSIHETDDPN

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.8

80.1

28.5

Major BPS

77.3

0.68

81.5

Major PPT

69.4

0.44

1.1

62.7

43.4

Minor 5ss

45.4

-0.5

2.7

60.6

44.5

Minor BPS

52.6

0.16

1.6

71.6

38.9

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976