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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5470005_5471066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5470005 - 5471066

Intron Length:

1062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGATC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

CTTACCCTAAGT

Flanking Amino Acid:

VSKCRSAGIKVIMVTGDHPI

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

35.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

63.7

0.31

67.3

32.9

Minor 5ss

35.4

-1.7

3.5

50.7

46.2

Minor BPS

55.3

0.25

2.1

77.43

44.6

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010090

5460531 - 5479506

18976

ENSAPLT00000034861

5460531 - 5479344

18814