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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5474088_5474165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5474088 - 5474165

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

TCTATCGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

TTTGCTTCTATC

Flanking Amino Acid:

LKKADIGIAMGVEEGRLIFD

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.1

49.8

46.2

Major BPS

62.7

0.32

1.2

39.8

Major PPT

74.5

0.55

0.9

37.5

Minor 5ss

40.1

-1.1

3.3

47.4

48.1

Minor BPS

-0.1

1.9

66.2

40.1

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814