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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5475035_5475625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5475035 - 5475625

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

ATTTCTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GCTACCAAGACT

Flanking Amino Acid:

ILFIDLGTDIIPSVALAYEK

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

67.9

38.2

Major BPS

0.72

38.9

Major PPT

78.8

0.65

0.9

73.9

36.1

Minor 5ss

43.1

-0.8

2.8

58.6

40.3

Minor BPS

46.9

-0.1

65.82

44.5

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976