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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5475750_5476077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5475750 - 5476077

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CCCTCCTTGATT

Flanking Amino Acid:

QLAVYSYLQIGIIQSVGAFV

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.5

0.66

0.9

72.8

36.4

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

69.7

0.7

1.3

74.27

43.5

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976