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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5476224_5476848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5476224 - 5476848

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGATG

5'SS Class:

major

3'SS Sequence:

CTTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTAACACAACT

Flanking Amino Acid:

DFEDSYGQQWTKYQRMYLQW

Intron Amino Acid Position:

916

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.7

44.4

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

34.8

-1.7

3.3

39.8

Minor BPS

-0

72.74

42.9

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976