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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5478032_5478689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5478032 - 5478689

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCACTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGCTTCTGAATG

Flanking Amino Acid:

HVTALNFTPLRFQYWFVAVP

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

70.9

0.47

0.8

61.5

33.8

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

58.7

0.14

1.5

60.39

41.9

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976