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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5478782_5478979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5478782 - 5478979

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATTTTTTTACCC

Flanking Amino Acid:

RKLLIRRYPGSWWDKNMYY*

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.4

0.66

0.9

74.6

33.8

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

66.5

0.5

1.5

75.75

34.8

Associated Gene:

Gene:

ATP12A

Ensembl Gene ID:

ENSAPLG00000009590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034861

5460531 - 5479344

18814

ENSAPLT00000010090

5460531 - 5479506

18976