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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5505553_5506805_R

Intron Information:

Intron Rank:

154284

Intron Class:

major

Intron Phase:

Intron Coordinates:

5505553 - 5506805

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

TCCTTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

TTTTCCTTTGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.6

40.1

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

78.1

0.63

0.8

76.9

31.9

Minor 5ss

38.4

-1.3

2.9

48.5

47.2

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033152

5504410 - 5507354

2945