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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5519671_5519902_R

Intron Information:

Intron Rank:

133253

Intron Class:

major

Intron Phase:

Intron Coordinates:

5519671 - 5519902

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TGCCACTGATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

71.2

0.53

37.5

Major PPT

85.6

0.8

0.7

84.5

23.3

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

46.5

-0.1

1.9

64.57

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024739

5518533 - 5520110

1578