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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5520862_5521052_R

Intron Information:

Intron Rank:

133256

Intron Class:

major

Intron Phase:

Intron Coordinates:

5520862 - 5521052

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

100

1.24

0.5

100

Major PPT

70.1

0.45

0.9

64.4

35.5

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

67.4

0.53

83.79

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037531

5518533 - 5522838

4306