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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5521274_5522725_R

Intron Information:

Intron Rank:

133257

Intron Class:

major

Intron Phase:

Intron Coordinates:

5521274 - 5522725

Intron Length:

1452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCGGTGA

5'SS Class:

major

3'SS Sequence:

TCTCTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

TGTTTCAGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.1

53.8

41.8

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

0.72

0.7

77.3

24.6

Minor 5ss

29.1

-2.4

3.3

43.5

Minor BPS

54.1

0.21

1.8

77.61

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037531

5518533 - 5522838

4306