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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5544243_5544439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5544243 - 5544439

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTGTTTCCATCT

Flanking Amino Acid:

LETRSLKDHKVSFLRSGTKL

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

80.8

28.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

-1.9

3.4

45.9

49.3

Minor BPS

45.3

-0.2

68.1

43.1

Associated Gene:

Gene:

C2CD2L

Ensembl Gene ID:

ENSAPLG00000009128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009541

5544025 - 5546794

2770