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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5544723_5545193_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5544723 - 5545193

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTCTGGC

5'SS Class:

weak_major

3'SS Sequence:

TAACCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GACTTTTTAACC

Flanking Amino Acid:

STLIISGVSKVPIAQDEMAL

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.4

54.5

44.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

70.6

0.46

0.9

33.7

Minor 5ss

40.1

-1.1

53.4

43.7

Minor BPS

0.54

1.2

67.52

38.2

Associated Gene:

Gene:

C2CD2L

Ensembl Gene ID:

ENSAPLG00000009128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009541

5544025 - 5546794

2770