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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5545328_5545904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5545328 - 5545904

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

TCTTGTCGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

GCTACTTCAAGT

Flanking Amino Acid:

CPRSLLASSSRDSQMPNGLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

40.9

Major BPS

69.4

0.48

71.6

33.8

Major PPT

74.5

0.55

0.9

72.8

37.5

Minor 5ss

35.2

-1.7

3.2

47.3

42.1

Minor BPS

48.8

-0

1.9

65.44

Associated Gene:

Gene:

C2CD2L

Ensembl Gene ID:

ENSAPLG00000009128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009541

5544025 - 5546794

2770