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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5554851_5555189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5554851 - 5555189

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCACTCTTACCC

Flanking Amino Acid:

RVLLGMHLDLGILYYVYMGM

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.7

33.5

Major BPS

77.3

0.68

81.5

Major PPT

75.3

0.57

0.8

30.4

Minor 5ss

-1.1

2.7

42.4

44.3

Minor BPS

56.7

0.19

1.6

64.02

41.5

Associated Gene:

Gene:

DPAGT1

Ensembl Gene ID:

ENSAPLG00000010165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010577

5554059 - 5557890

3832