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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5555337_5555466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5555337 - 5555466

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TGTCTTAGAACA

Flanking Amino Acid:

IIVFNIVELNGDYQDDHIFS

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

75.2

36.2

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

32.1

-2

3.1

40.3

45.6

Minor BPS

48.4

-0.1

1.7

63.34

36.2

Associated Gene:

Gene:

DPAGT1

Ensembl Gene ID:

ENSAPLG00000010165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010577

5554059 - 5557890

3832