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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5555552_5556123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5555552 - 5556123

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTACGGACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TTTGCCCTACGG

Flanking Amino Acid:

FTTLGLFYHNWYPSQVFVGD

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

67.9

37.5

Major BPS

0.57

1.2

41.2

Major PPT

63.5

0.3

54.9

39.9

Minor 5ss

29.9

-2.3

3.3

35.5

43.1

Minor BPS

45.3

-0.4

2.3

59.58

47.9

Associated Gene:

Gene:

DPAGT1

Ensembl Gene ID:

ENSAPLG00000010165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010577

5554059 - 5557890

3832