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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5556313_5556912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5556313 - 5556912

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AAGACTTTAATG

Flanking Amino Acid:

VIPCPRHRLPRLNPSTGKLE

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

71.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

77.3

0.61

0.8

74.8

35.5

Minor 5ss

37.1

-1.5

3.3

49.8

46.8

Minor BPS

58.7

0.13

1.4

55.52

40.2

Associated Gene:

Gene:

DPAGT1

Ensembl Gene ID:

ENSAPLG00000010165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010577

5554059 - 5557890

3832