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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5557001_5557361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5557001 - 5557361

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAT

U12 Branch Point Sequence:

AGCTGATGAAAT

Flanking Amino Acid:

LSALGAYTLKAVKSLHIVDV

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

67.2

Major BPS

58.4

0.21

1.2

38.7

Major PPT

0.74

0.7

77.4

31.3

Minor 5ss

32.3

-2

40.9

44.8

Minor BPS

42.7

-0.4

2.1

58.88

43.4

Associated Gene:

Gene:

DPAGT1

Ensembl Gene ID:

ENSAPLG00000010165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010577

5554059 - 5557890

3832