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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5569134_5569911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5569134 - 5569911

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CGGGCGCTGACG

Flanking Amino Acid:

RDLHDQFQHQLKCSNDGFSV

Intron Amino Acid Position:

876

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

72.7

0.51

0.9

66.4

35.7

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

38.4

-1

2.3

39.44

44.4

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580