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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5570135_5570256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5570135 - 5570256

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCAGGAC

5'SS Class:

major

3'SS Sequence:

CTGTCACTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CTTTCTGTCACT

Flanking Amino Acid:

IRQEIEELKASPKIFQKTKC

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

36.2

Major BPS

0.6

65.6

41.1

Major PPT

77.8

0.63

0.9

35.7

Minor 5ss

22.4

-3.2

3.5

31.1

43.3

Minor BPS

51.6

0.13

2.4

78.9

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580