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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5570429_5570942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5570429 - 5570942

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATAATG

5'SS Class:

major

3'SS Sequence:

TGGTTATCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

TTGTGTTTAAAC

Flanking Amino Acid:

ENKNLMPPLLVVQTLAHNST

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

70.1

40.1

Major BPS

72.4

0.56

79.3

29.5

Major PPT

73.3

0.52

0.9

70.4

40.3

Minor 5ss

37.3

-1.4

46.6

42.8

Minor BPS

59.6

0.28

1.9

71.11

40.5

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580