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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5571146_5571456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5571146 - 5571456

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

CTCTTTTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCTTGTTGATG

Flanking Amino Acid:

GVLYLYEQGKLFQQIMHYHM

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

74.7

35.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.1

0.77

0.7

80.6

24.7

Minor 5ss

36.1

-1.6

3.5

45.5

Minor BPS

49.7

-0.1

2.1

61.1

41.9

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580