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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5571597_5572071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5571597 - 5572071

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGAGTT

5'SS Class:

major

3'SS Sequence:

CTGTTTCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TACCTCTCATTT

Flanking Amino Acid:

QNWAHEQDKQIKEKLHNEAL

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

72.8

36.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

78.5

0.64

0.8

31.2

Minor 5ss

38.8

-1.3

3.4

56.5

47.8

Minor BPS

-0.1

1.7

62.34

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580