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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5572234_5572560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5572234 - 5572560

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAC

U12 Branch Point Sequence:

TCCTGTTCTACA

Flanking Amino Acid:

EGLGLLEGKKANSEEFIPIF

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

53.6

0.09

1.4

49.1

Major PPT

81.6

0.71

0.8

75.6

33.1

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

43.5

-0.5

2.2

54.67

44.4

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580