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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5572750_5573221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5572750 - 5573221

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

GCTGCCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

GCTGCCTCCACA

Flanking Amino Acid:

YLKIQLEDIKNYQEALHYIG

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

84.7

28.2

Major BPS

72.5

0.56

1.2

63.4

Major PPT

68.6

0.42

0.9

60.8

35.3

Minor 5ss

38.4

-1.3

3.4

49.2

Minor BPS

47.9

-0.1

2.1

60.01

45.8

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580