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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5573366_5573770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5573366 - 5573770

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGGG

5'SS Class:

major

3'SS Sequence:

TCTGTTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAC

U12 Branch Point Sequence:

TACTGCTTAGTC

Flanking Amino Acid:

DSSKLEEFIKTSESEVRFDV

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

60.6

44.2

Major BPS

56.3

0.16

1.3

49.1

Major PPT

81.8

0.72

0.8

77.2

31.5

Minor 5ss

28.7

-2.4

3.5

38.3

46.7

Minor BPS

51.1

0.01

63.14

42.9

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580