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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5574743_5575022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5574743 - 5575022

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCACGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CTGTATTTAACA

Flanking Amino Acid:

QEKDTQTKLEMLFRKNLFEM

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.9

75.9

39.6

Major BPS

0.5

1.1

71.2

35.2

Major PPT

73.9

0.54

69.3

40.4

Minor 5ss

23.6

-3

3.7

32.8

42.1

Minor BPS

66.4

0.51

1.5

71.81

40.6

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580