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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5576153_5576671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5576153 - 5576671

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TCCTTTTCATCA

Flanking Amino Acid:

VHENLNFMAIGFADGSVVLT

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

0.7

0.8

81.4

29.1

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

-0.1

1.8

58.16

42.3

Associated Gene:

Gene:

VPS11

Ensembl Gene ID:

ENSAPLG00000007732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008060

5568969 - 5577548

8580