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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5609987_5611119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5609987 - 5611119

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GCAGAGTTAACT

Flanking Amino Acid:

RPMLPPGSMSGVTGNQTNQL

Intron Amino Acid Position:

1124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.4

31.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

78.3

0.64

0.7

77.5

24.5

Minor 5ss

39.2

-1.2

43.2

Minor BPS

-0.2

2.3

62.34

Associated Gene:

Gene:

BCL9L

Ensembl Gene ID:

ENSAPLG00000006957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007221

5608827 - 5619259

10433