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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5611387_5611611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5611387 - 5611611

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTTGC

5'SS Class:

major

3'SS Sequence:

TTCTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

CAGTACTGAGCC

Flanking Amino Acid:

SSASMAGLDQGSLPSGPRSS

Intron Amino Acid Position:

1035

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

64.3

43.1

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

85.9

0.81

0.8

80.6

31.5

Minor 5ss

-1.2

43.8

Minor BPS

-0.3

1.9

53.69

43.5

Associated Gene:

Gene:

BCL9L

Ensembl Gene ID:

ENSAPLG00000006957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007221

5608827 - 5619259

10433