Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_5615457_5616957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5615457 - 5616957

Intron Length:

1501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TGTGCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

GCTTTACTAACT

Flanking Amino Acid:

EDDKPISSAHNCNVADPAMS

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

72.6

0.51

0.9

66.1

35.8

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

53.1

0.18

74.4

Associated Gene:

Gene:

BCL9L

Ensembl Gene ID:

ENSAPLG00000006957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007221

5608827 - 5619259

10433