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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5677240_5677318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5677240 - 5677318

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCTG

5'SS Class:

major

3'SS Sequence:

CTTGTGCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

ATGGCCCGACCT

Flanking Amino Acid:

FKLHCFQTLTGIKFVVLADP

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

75.9

0.58

0.9

40.9

Minor 5ss

33.4

-1.9

3.6

47.4

Minor BPS

44.2

-0.3

2.1

63.89

Associated Gene:

Gene:

TRAPPC4

Ensembl Gene ID:

ENSAPLG00000006876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007128

5676325 - 5677935

1611