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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5693337_5694624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5693337 - 5694624

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGTGGCCT

5'SS Class:

major

3'SS Sequence:

TTTCTTTACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATTTCTTTACAC

Flanking Amino Acid:

GKQEGKEWVGRSKTEKKPEA

Intron Amino Acid Position:

970

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

58.5

40.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.6

0.76

0.8

80.2

30.8

Minor 5ss

35.7

-1.6

3.3

48.2

41.9

Minor BPS

62.9

0.38

1.7

73.83

36.9

Associated Gene:

Gene:

HYOU1

Ensembl Gene ID:

ENSAPLG00000006043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006310

5693275 - 5706722

13448