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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5695413_5695931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5695413 - 5695931

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTTGGTTAAACA

Flanking Amino Acid:

SLLNHSNIFLKGARMIPESD

Intron Amino Acid Position:

851

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

31.9

Major BPS

58.9

0.22

49.8

35.1

Major PPT

79.4

0.66

83.6

31.9

Minor 5ss

32.4

-2

3.3

39.8

Minor BPS

50.4

0.01

2.2

70.26

42.8

Associated Gene:

Gene:

HYOU1

Ensembl Gene ID:

ENSAPLG00000006043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006310

5693275 - 5706722

13448