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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5696066_5696482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5696066 - 5696482

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

CCCCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TTGCTTTCTACT

Flanking Amino Acid:

EEEGYAAATKELKDKLAELK

Intron Amino Acid Position:

807

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.9

45.4

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

83.8

0.76

0.7

78.9

26.6

Minor 5ss

40.5

-1.1

3.3

55.9

48.3

Minor BPS

-0

1.8

68.96

Associated Gene:

Gene:

HYOU1

Ensembl Gene ID:

ENSAPLG00000006043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006310

5693275 - 5706722

13448