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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5702291_5703066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5702291 - 5703066

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTATATCC

Flanking Amino Acid:

TQPQLQIQGIGFDRTLGGLE

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

49.1

-0

1.9

67.4

38.2

Associated Gene:

Gene:

HYOU1

Ensembl Gene ID:

ENSAPLG00000006043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006310

5693275 - 5706722

13448