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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5704903_5704968_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5704903 - 5704968

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACTTGCT

5'SS Class:

weak_major

3'SS Sequence:

AAGGACCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTATAA

U12 Branch Point Sequence:

TAGTCTATAAGG

Flanking Amino Acid:

KLRGSFISCPVAFRYFQDLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.2

56.1

41.1

Major BPS

57.5

0.19

1.1

55.2

40.4

Major PPT

46.7

-0.1

35.3

35.5

Minor 5ss

37.2

-1.4

3.5

59.8

44.6

Minor BPS

49.1

-0.2

57.15

44.4

Associated Gene:

Gene:

HYOU1

Ensembl Gene ID:

ENSAPLG00000006043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006310

5693275 - 5706722

13448